| e1071 |
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien |
| eaf |
Plots of the Empirical Attainment Function |
| earlywarnings |
Early Warning Signals Toolbox for Detecting Critical Transitions in Timeseries |
| earth |
Multivariate Adaptive Regression Splines |
| EasyABC |
Efficient Approximate Bayesian Computation Sampling Schemes |
| easyanova |
Analysis of variance and other important complementary analyzes |
| easyformatr |
Tools for Building R Formats |
| EasyHTMLReport |
EasyHTMLReport |
| EasyMARK |
Utility functions for working with mark-recapture data |
| easynls |
Easy nonlinear model |
| easypackages |
Easy Loading and Installing of Packages |
| easypower |
Sample Size Estimation for Experimental Designs |
| easyPubMed |
Search and Retrieve Scientific Publication Records from Pubmed |
| EasyStrata |
Evaluation of stratified genome-wide association meta-analysis results |
| easyVerification |
Ensemble Forecast Verification for Large Data Sets |
| eba |
Elimination-by-Aspects Models |
| ebal |
Entropy reweighting to create balanced samples |
| EbayesThresh |
Empirical Bayes Thresholding and Related Methods |
| ebdbNet |
Empirical Bayes Estimation of Dynamic Bayesian Networks |
| EBEN |
Empirical Bayesian Elastic Net |
| ebGenotyping |
Genotyping and SNP Detection using Next Generation Sequencing Data |
| EBglmnet |
Empirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models |
| EBMAforecast |
Ensemble BMA Forecasting |
| EBS |
Exact Bayesian Segmentation |
| ebSNP |
Genotyping and SNP calling using single-sample next generation sequencing data |
| ecb |
Programmatic Access to the European Central Bank's Statistical Data Warehouse (SDW) |
| ECctmc |
Simulation from Endpoint-Conditioned Continuous Time Markov Chains |
| ecd |
Elliptic Distribution and Lambda Option Pricing Model |
| Ecdat |
Data Sets for Econometrics |
| ecespa |
Functions for Spatial Point Pattern Analysis |
| Ecfun |
Functions for Ecdat |
| ECharts2Shiny |
Embedding Charts Generated with ECharts Library into Shiny Applications |
| ecipex |
Efficient calculation of fine structure isotope patterns via Fourier transforms of simplex-based elemental models |
| eco |
Ecological Inference in 2x2 Tables |
| ecodist |
Dissimilarity-based functions for ecological analysis |
| ecoengine |
Programmatic Interface to the API Serving UC Berkeley's Natural History Data |
| EcoGenetics |
Spatial Analysis of Phenotypic, Genotypic and Environmental Data |
| EcoHydRology |
A community modeling foundation for Eco-Hydrology |
| ecolMod |
"A practical guide to ecological modelling - using R as a simulation platform" |
| EconDemand |
General Analysis of Various Economics Demand Systems |
| ecoreg |
Ecological Regression using Aggregate and Individual Data |
| ecoretriever |
R Interface to the EcoData Retriever |
| ecosim |
Toolbox for Aquatic Ecosystem Modeling |
| EcoSimR |
Null Model Analysis for Ecological Data |
| ECOSolveR |
Embedded Conic Solver in R |
| ecospace |
Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks |
| ecospat |
Spatial Ecology Miscellaneous Methods |
| ecotoxicology |
Methods for Ecotoxicology |
| EcoTroph |
EcoTroph R package |
| ecoval |
Procedures for Ecological Assessment of Surface Waters |
| EcoVirtual |
Simulation of Ecological Models |
| ecp |
Non-Parametric Multiple Change-Point Analysis of Multivariate Data |
| edcc |
Economic Design of Control Charts |
| edci |
Edge Detection and Clustering in Images |
| edeaR |
Exploratory and Descriptive Event-Based Data Analysis |
| edeR |
Email Data Extraction Using R |
| edesign |
Maximum Entropy Sampling |
| edf |
Read Data from European Data Format (EDF and EDF+) Files |
| EDFIR |
Estimating Discrimination Factors |
| edfReader |
Reading EDF(+) and BDF(+) Files |
| edgar |
Platform for EDGAR Filing Management |
| edgebundleR |
Circle Plot with Bundled Edges |
| edgeCorr |
Spatial Edge Correction |
| edgeRun |
More Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data |
| EDISON |
Network Reconstruction and Changepoint Detection |
| EditImputeCont |
Simultaneous Edit-Imputation for Continuous Microdata |
| editrules |
Parsing, Applying, and Manipulating Data Cleaning Rules |
| EDR |
Estimation of the effective dimension reduction (EDR) space |
| edrGraphicalTools |
Provides tools for dimension reduction methods |
| eechidna |
Exploring Election and Census Highly Informative Data Nationally for Australia |
| eegAnalysis |
Tools for analysis and classification of electroencephalography (EEG) data |
| eegkit |
Toolkit for Electroencephalography Data |
| eegkitdata |
Data for package eegkit |
| eel |
Extended Empirical Likelihood |
| EEM |
Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data |
| eemR |
Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data |
| eeptools |
Convenience Functions for Education Data |
| EFDR |
Wavelet-Based Enhanced FDR for Signal Detection in Noisy Images |
| EffectLiteR |
Average and Conditional Effects |
| effects |
Effect Displays for Linear, Generalized Linear, and Other Models |
| EffectsRelBaseline |
Test changes of a grouped response relative to baseline |
| EffectStars |
Visualization of Categorical Response Models |
| EffectTreat |
Prediction of Therapeutic Success |
| efflog |
The Causal Effects for a Causal Loglinear Model |
| effsize |
Efficient Effect Size Computation |
| efreadr |
Read European Fluxes CSV Files |
| ega |
Error Grid Analysis |
| egcm |
Engle-Granger Cointegration Models |
| eggCounts |
Hierarchical Modelling of Faecal Egg Counts |
| egonet |
Tool for ego-centric measures in Social Network Analysis |
| EGRET |
Exploration and Graphics for RivEr Trends (EGRET) |
| EGRETci |
Exploration and Graphics for RivEr Trends (EGRET) Confidence Intervals |
| eha |
Event History Analysis |
| eHOF |
Extended HOF (Huisman-Olff-Fresco) Models |
| ei |
Ecological Inference |
| EIAdata |
R Wrapper for the Energy Information Administration (EIA) API |
| eiCompare |
Compares EI, Goodman, RxC Estimates |
| eigeninv |
Generates (dense) matrices that have a given set of eigenvalues |
| eigenmodel |
Semiparametric factor and regression models for symmetric relational data |
| eigenprcomp |
Computes confidence intervals for principal components |
| EILA |
Efficient Inference of Local Ancestry |
| eiPack |
eiPack: Ecological Inference and Higher-Dimension Data Management |
| eive |
An algorithm for reducing errors-in-variable bias in simple linear regression |
| eiwild |
Ecological Inference with individual and aggregate data |
| EL |
Two-sample Empirical Likelihood |
| elasso |
Enhanced Least Absolute Shrinkage and Selection Operator Regression Model |
| elastic |
General Purpose Interface to 'Elasticsearch' |
| elasticnet |
Elastic-Net for Sparse Estimation and Sparse PCA |
| elec |
Collection of functions for statistical election audits |
| elec.strat |
Functions for election audits using stratified random samples |
| ElemStatLearn |
Data Sets, Functions and Examples from the Book: "The Elements of Statistical Learning, Data Mining, Inference, and Prediction" by Trevor Hastie, Robert Tibshirani and Jerome Friedman |
| elexr |
Load Associated Press Election Results with Elex |
| elliplot |
Ellipse Summary Plot of Quantiles |
| ellipse |
Functions for drawing ellipses and ellipse-like confidence regions |
| elliptic |
Elliptic Functions |
| elmNN |
Implementation of ELM (Extreme Learning Machine ) algorithm for SLFN ( Single Hidden Layer Feedforward Neural Networks ) |
| ELMR |
Extreme Machine Learning (ELM) |
| EloChoice |
Preference Rating for Visual Stimuli Based on Elo Ratings |
| EloRating |
Animal Dominance Hierarchies by Elo Rating |
| elrm |
Exact Logistic Regression via MCMC |
| ElstonStewart |
Elston-Stewart Algorithm |
| ELT |
Experience Life Tables |
| ELYP |
Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model |
| EMA |
Easy Microarray data Analysis |
| EMbC |
Expectation-Maximization Binary Clustering |
| embryogrowth |
Tools to Analyze the Thermal Reaction Norm of Embryo Growth |
| EMC |
Evolutionary Monte Carlo (EMC) algorithm |
| EMCluster |
EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution |
| EMD |
Empirical Mode Decomposition and Hilbert Spectral Analysis |
| emdbook |
Support Functions and Data for "Ecological Models and Data" |
| emdist |
Earth Mover's Distance |
| emg |
Exponentially Modified Gaussian (EMG) Distribution |
| emil |
Evaluation of Modeling without Information Leakage |
| emIRT |
EM Algorithms for Estimating Item Response Theory Models |
| EmiStatR |
Estimation of Wastewater Emissions in Combined Sewer Systems |
| emma |
Evolutionary model-based multiresponse approach |
| EMMAgeo |
End-Member Modelling of Grain-Size Data |
| emme2 |
Read and Write to an EMME/2 databank |
| EMMIXcontrasts |
Contrasts in mixed effects for EMMIX model with random effects |
| EMMIXskew |
The EM Algorithm and Skew Mixture Distribution |
| EMMIXuskew |
Fitting Unrestricted Multivariate Skew t Mixture Models |
| EMMLi |
A Maximum Likelihood Approach to the Analysis of Modularity |
| EMMREML |
Fitting Mixed Models with Known Covariance Structures |
| emoa |
Evolutionary Multiobjective Optimization Algorithms |
| emojifont |
Emoji Fonts for using in R |
| emov |
Eye Movement Analysis Package for Fixation and Saccade Detection |
| EMP |
Expected Maximum Profit Classification Performance Measure |
| EmpiricalCalibration |
Routines for Performing Empirical Calibration of Observational Study Estimates |
| empiricalFDR.DESeq2 |
Simulation-Based False Discovery Rate in RNA-Seq |
| emplik |
Empirical Likelihood Ratio for Censored/Truncated Data |
| emplik2 |
Empirical Likelihood Ratio Test for Two Samples with Censored Data |
| EMSC |
Extended Multiplicative Signal Correction |
| EMT |
Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate data |
| emulator |
Bayesian emulation of computer programs |
| emuR |
Main Package of the EMU Speech Database Management System |
| EMVC |
Entropy Minimization over Variable Clusters (EMVC) |
| enaR |
Tools for Ecological Network Analysis |
| endogMNP |
R Package for Fitting Multinomial Probit Models with Endogenous Selection |
| endorse |
R Package for Analyzing Endorsement Experiments |
| energy |
E-statistics (energy statistics) |
| energyr |
Data Published by the United States Federal Energy Regulatory Commission |
| english |
Translate integers into English |
| EngrExpt |
Data sets from "Introductory Statistics for Engineering Experimentation" |
| engsoccerdata |
English and European Soccer Results 1871-2016 |
| enigma |
Client for the 'Enigma' 'API' |
| ENiRG |
Ecological Niche in R and GRASS |
| ENMeval |
Automated Runs and Evaluations of Ecological Niche Models |
| ENmisc |
Neuwirth miscellaneous |
| enpls |
Ensemble Partial Least Squares Regression |
| EnQuireR |
A package dedicated to questionnaires |
| enRich |
An R Package for the Analysis of Multiple ChIP-Seq Data |
| enrichvs |
Enrichment assessment of virtual screening approaches |
| EnsembleBase |
Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling |
| ensembleBMA |
Probabilistic Forecasting using Ensembles and Bayesian Model Averaging |
| EnsembleCV |
Extensible Package for Cross-Validation-Based Integration of Base Learners |
| ensembleMOS |
Ensemble Model Output Statistics |
| EnsemblePCReg |
Extensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning |
| EnsemblePenReg |
Extensible Classes and Methods for Penalized-Regression-based Integration of Base Learners |
| ensurer |
Ensure Values at Runtime |
| entropart |
Entropy Partitioning to Measure Diversity |
| entropy |
Estimation of Entropy, Mutual Information and Related Quantities |
| EntropyEstimation |
Estimation of Entropy and Related Quantities |
| EntropyExplorer |
Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression |
| enveomics.R |
Various R Functions from the Kostas Lab |
| enviPat |
Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry |
| enviPick |
Peak Picking for High Resolution Mass Spectrometry Data |
| EnviroStat |
Statistical Analysis of Environmental Space-Time Processes |
| envlpaster |
Enveloping the Aster Model |
| EnvNicheR |
Niche Estimation |
| EnvStats |
Package for Environmental Statistics, Including US EPA Guidance |
| epade |
Easy Plots |
| epandist |
Statistical Functions for the Censored and Uncensored Epanechnikov Distribution |
| epanetReader |
Read Epanet Files into R |
| EPGLM |
Gaussian Approximation of Bayesian Binary Regression Models |
| Epi |
A Package for Statistical Analysis in Epidemiology |
| epibasix |
Elementary Epidemiological Functions for Epidemiology and Biostatistics |
| EpiBayes |
Implements Hierarchical Bayesian Models for Epidemiological Applications |
| EpiContactTrace |
Epidemiological Tool for Contact Tracing |
| epiDisplay |
Epidemiological Data Display Package |
| EpiDynamics |
Dynamic Models in Epidemiology |
| EpiEstim |
EpiEstim: a package to estimate time varying reproduction numbers from epidemic curves |
| epifit |
Flexible Modelling Functions for Epidemiological Data Analysis |
| EpiModel |
Mathematical Modeling of Infectious Disease |
| epinet |
Epidemic/Network-Related Tools |
| epiR |
Tools for the Analysis of Epidemiological Data |
| episensr |
Basic Sensitivity Analysis of Epidemiological Results |
| episplineDensity |
Density Estimation with Soft Information by Exponential Epi-splines |
| epitools |
Epidemiology Tools |
| EpiWeek |
Conversion Between Epidemiological Weeks and Calendar Dates |
| Eplot |
Plotting longitudinal series |
| epoc |
EPoC (Endogenous Perturbation analysis of Cancer) |
| epr |
Easy polynomial regression |
| EQL |
Extended-Quasi-Likelihood-Function (EQL) |
| eqs2lavaan |
EQS Output Conversion to lavaan Functions |
| eqtl |
Tools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis |
| equate |
Observed-Score Linking and Equating |
| equateIRT |
Direct, Chain and Average Equating Coefficients with Standard Errors Using IRT Methods |
| equivalence |
Provides Tests and Graphics for Assessing Tests of Equivalence |
| erah |
Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics |
| erboost |
Nonparametric Multiple Expectile Regression via ER-Boost |
| erer |
Empirical Research in Economics with R |
| ergm |
Fit, Simulate and Diagnose Exponential-Family Models for Networks |
| ergm.count |
Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges |
| ergm.ego |
Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data |
| ergm.graphlets |
ERG Modeling Based on Graphlet Properties |
| ergmharris |
Local Health Department network data set |
| ergm.rank |
Fit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data |
| ergm.userterms |
User-specified terms for the statnet suite of packages |
| eRm |
Extended Rasch Modeling |
| ERP |
Significance Analysis of Event-Related Potentials Data |
| erp.easy |
Event-Related Potential (ERP) Data Exploration Made Easy |
| erpR |
Event-related potentials (ERP) analysis, graphics and utility functions |
| errint |
Build Error Intervals |
| ES |
Edge Selection |
| esaBcv |
Estimate Number of Latent Factors and Factor Matrix for Factor Analysis |
| esc |
Effect Size Computation for Meta Analysis |
| ESEA |
ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis |
| ESG |
ESG - A package for asset projection |
| ESGtoolkit |
Toolkit for the simulation of financial assets and interest rates models |
| ESKNN |
Ensemble of Subset of K-Nearest Neighbours Classifiers for Classification and Class Membership Probability Estimation |
| estatapi |
R Interface to e-Stat API |
| EstCRM |
Calibrating Parameters for the Samejima's Continuous IRT Model |
| EstHer |
Estimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection |
| estimability |
Tools for Assessing Estimability of Linear Predictions |
| estout |
Estimates Output |
| EstSimPDMP |
Estimation and Simulation for PDMPs |
| etable |
Easy Table |
| ETAS |
Modeling Earthquake Data Using ETAS Model |
| etasFLP |
Mixed FLP and ML Estimation of ETAS Space-Time Point Processes |
| ETC |
Equivalence to control |
| etl |
Extract-Transfer-Load Framework for Medium Data |
| ETLUtils |
Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data |
| etm |
Empirical Transition Matrix |
| etma |
Epistasis Test in Meta-Analysis |
| etrunct |
Computes Moments of Univariate Truncated t Distribution |
| eulerian |
eulerian: A package to find eulerian paths from graphs |
| euroMix |
Calculations for DNA Mixtures |
| europepmc |
R Interface to the Europe PubMed Central RESTful Web Service |
| EurosarcBayes |
Bayesian Single Arm Sample Size Calculation Software |
| eurostat |
Tools for Eurostat Open Data |
| eva |
Extreme Value Analysis with Goodness-of-Fit Testing |
| EvalEst |
Dynamic Systems Estimation - Extensions |
| evaluate |
Parsing and Evaluation Tools that Provide More Details than the Default |
| Evapotranspiration |
Modelling Actual, Potential and Reference Crop Evapotranspiration |
| evclass |
Evidential Distance-Based Classification |
| evclust |
Evidential Clustering |
| EvCombR |
Evidence Combination in R |
| evd |
Functions for Extreme Value Distributions |
| evdbayes |
Bayesian Analysis in Extreme Value Theory |
| eVenn |
A Powerful Tool to Quickly Compare Huge Lists and Draw Venn Diagrams |
| eventInterval |
Sequential Event Interval Analysis |
| events |
Store and manipulate event data |
| eventstudies |
Event study and extreme event analysis |
| evir |
Extreme Values in R |
| evmix |
Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation |
| evobiR |
Comparative and Population Genetic Analyses |
| evolqg |
Tools for Evolutionary Quantitative Genetics |
| evolvability |
Calculation of Evolvability Parameters |
| Evomorph |
Evolutionary Morphometric Simulation |
| evoper |
Evolutionary Parameter Estimation for 'Repast Simphony' Models |
| EvoRAG |
Evolutionary Rates Across Gradients |
| evt0 |
Mean of order p, peaks over random threshold Hill and high quantile estimates |
| evtree |
Evolutionary Learning of Globally Optimal Trees |
| EW |
Edgeworth Expansion |
| EWGoF |
Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions |
| Exact |
Unconditional Exact Test |
| exact2x2 |
Exact Conditional Tests and Confidence Intervals for 2x2 tables |
| exactci |
Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases |
| ExactCIdiff |
Inductive Confidence Intervals for the difference between two proportions |
| exactLoglinTest |
Monte Carlo Exact Tests for Log-linear models |
| exactmeta |
Exact fixed effect meta analysis |
| ExactPath |
Exact solution paths for regularized LASSO regressions with L_1 penalty |
| exactRankTests |
Exact Distributions for Rank and Permutation Tests |
| exams |
Automatic Generation of Exams in R |
| ExceedanceTools |
Confidence regions for exceedance sets and contour lines |
| excel.link |
Convenient Data Exchange with Microsoft Excel |
| exCon |
Interactive Exploration of Contour Data |
| excursions |
Excursion Sets and Contour Credibility Regions for Random Fields |
| exif |
Read EXIF Metadata from JPEGs |
| exifr |
EXIF Image Data in R |
| ExomeDepth |
Calls Copy Number Variants from Targeted Sequence Data |
| expands |
Expanding Ploidy and Allele-Frequency on Nested Subpopulations |
| ExpDE |
Modular Differential Evolution for Experimenting with Operators |
| ExpDes |
Experimental Designs package |
| ExpDes.pt |
Pacote Experimental Designs (Portuguese) |
| expectreg |
Expectile and Quantile Regression |
| experiment |
experiment: R package for designing and analyzing randomized experiments |
| expert |
Modeling without data using expert opinion |
| ExplainPrediction |
Explanation of Predictions for Classification and Regression Models |
| explor |
Interactive Interfaces for Results Exploration |
| exploreR |
Tools for Quickly Exploring Data |
| expm |
Matrix Exponential |
| expoRkit |
Expokit in R |
| ExPosition |
Exploratory analysis with the singular value decomposition |
| expoTree |
Calculate density dependent likelihood of a phylogenetic tree |
| expp |
Spatial analysis of extra-pair paternity |
| expsmooth |
Data Sets from "Forecasting with Exponential Smoothing" |
| expss |
Some Useful Functions from Spreadsheets and 'SPSS' Statistics |
| exptest |
Tests for Exponentiality |
| exreport |
Fast, Reliable and Elegant Reproducible Research |
| EXRQ |
Extreme Regression of Quantiles |
| exsic |
Convenience Functions for Botanists to Create Specimens Indices |
| ExtDist |
Extending the Range of Functions for Probability Distributions |
| extfunnel |
Additional Funnel Plot Augmentations |
| extlasso |
Maximum penalized likelihood estimation with extended lasso penalty |
| extraBinomial |
Extra-binomial approach for pooled sequencing data |
| extracat |
Categorical Data Analysis and Visualization |
| extraDistr |
Additional Univariate and Multivariate Distributions |
| extrafont |
Tools for using fonts |
| extrafontdb |
Package for holding the database for the extrafont package |
| extraTrees |
Extremely Randomized Trees (ExtraTrees) Method for Classification and Regression |
| ExtremeBounds |
Extreme Bounds Analysis (EBA) |
| extremefit |
Estimation of Extreme Conditional Quantiles and Probabilities |
| extRemes |
Extreme Value Analysis |
| extremeStat |
Extreme Value Statistics and Quantile Estimation |
| extremevalues |
Univariate Outlier Detection |
| extremogram |
Estimation of Extreme Value Dependence for Time Series Data |
| extWeibQuant |
Estimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture |
| eyelinker |
Load Raw Data from Eyelink Eye Trackers |
| eyetracking |
Eyetracking Helper Functions |
| eyetrackingR |
Eye-Tracking Data Analysis |
| ez |
Easy Analysis and Visualization of Factorial Experiments |
| ezec |
Easy Interface to Effective Concentration Calculations |
| ezglm |
selects significant non-additive interaction between two variables using fast GLM implementation |
| ezknitr |
Avoid the Typical Working Directory Pain When Using 'knitr' |
| ezsim |
provide an easy to use framework to conduct simulation |
| ezsummary |
Generate Data Summary in a Tidy Format |