| h2o |
R Interface for H2O |
| h5 |
Interface to the 'HDF5' Library |
| haarfisz |
Software to perform Haar Fisz transforms |
| HAC |
Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC) |
| HadoopStreaming |
Utilities for using R scripts in Hadoop streaming |
| hail |
Read HYDRA Rainfall Data |
| hamlet |
Hierarchical Optimal Matching and Machine Learning Toolbox |
| HandTill2001 |
Multiple Class Area under ROC Curve |
| Hankel |
Univariate non-parametric two-sample test based on empirical Hankel transforms |
| hapassoc |
Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm |
| HapEstXXR |
Multi-Locus Stepwise Regression |
| HAPim |
HapIM |
| Haplin |
Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes |
| haplo.ccs |
Estimate Haplotype Relative Risks in Case-Control Data |
| HaploSim |
Functions to simulate haplotypes |
| haplo.stats |
Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous |
| haplotyper |
Tool for Clustering Genotypes in Haplotypes |
| haplotypes |
Haplotype Inference and Statistical Analysis of Genetic Variation |
| HAP.ROR |
Recursive Organizer (ROR) |
| HardyWeinberg |
Statistical Tests and Graphics for Hardy-Weinberg Equilibrium |
| HarmonicRegression |
Harmonic Regression to One or more Time Series |
| harvestr |
A Parallel Simulation Framework |
| Harvest.Tree |
Harvest the Classification Tree |
| hash |
Full feature implementation of hash/associated arrays/dictionaries |
| hashFunction |
A collection of non-cryptographic hash functions |
| hashids |
Generate Short Unique YouTube-Like IDs (Hashes) from Integers |
| hashmap |
The Faster Hash Map |
| hashr |
Hash R Objects to Integers Fast |
| hasseDiagram |
Drawing Hasse diagram |
| haven |
Import 'SPSS', 'Stata' and 'SAS' Files |
| hawkes |
Hawkes process simulation and calibration toolkit |
| hazus |
Damage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters |
| hBayesDM |
Hierarchical Bayesian Modeling of Decision-Making Tasks |
| HBglm |
Hierarchical Bayesian Regression for GLMs |
| hbim |
Hill/Bliss Independence Model for Combination Vaccines |
| hbm |
Hierarchical Block Matrix Analysis |
| hbmem |
Hierarchical Bayesian Analysis of Recognition Memory |
| hbsae |
Hierarchical Bayesian Small Area Estimation |
| HBSTM |
Hierarchical Bayesian Space-Time models for Gaussian space-time data |
| hcc |
Hidden correlation check |
| hcci |
Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap) |
| hcp |
Change Point Estimation for Regression with Heteroscedastic Data |
| hda |
Heteroscedastic Discriminant Analysis |
| HDclassif |
High Dimensional Supervised Classification and Clustering |
| HDDesign |
Sample Size Calculation for High Dimensional Classification Study |
| hddplot |
Use known groups in high-dimensional data to derive scores for plots |
| hddtools |
Hydrological Data Discovery Tools |
| hdeco |
Hierarchical DECOmposition of Entropy for Categorical Map Comparisons |
| HDGLM |
Tests for High Dimensional Generalized Linear Models |
| hdi |
High-Dimensional Inference |
| HDInterval |
Highest (Posterior) Density Intervals |
| hdlm |
Fitting High Dimensional Linear Models |
| hdm |
High-Dimensional Metrics |
| HDMD |
Statistical Analysis Tools for High Dimension Molecular Data (HDMD) |
| hdnom |
Nomograms for High-Dimensional Cox Models |
| HDoutliers |
Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers |
| HDPenReg |
High-Dimensional Penalized Regression |
| hdr |
Interface to the UNDR Human Development Report API |
| hdrcde |
Highest density regions and conditional density estimation |
| HDtweedie |
The Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm |
| HEAT |
Health Effects of Air Pollution and Temperature (HEAT) |
| heatex |
Heat exchange calculations during physical activity |
| heatmap3 |
An Improved Heatmap Package |
| heatmapFit |
Fit Statistic for Binary Dependent Variable Models |
| heatmaply |
Interactive Heat Maps Using 'plotly' |
| heatmap.plus |
Heatmap with more sensible behavior |
| heavy |
Robust Estimation Using Heavy-Tailed Distributions |
| heemod |
Models for Health Economic Evaluation |
| hellno |
Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()' |
| helloJavaWorld |
Hello Java World |
| HelpersMG |
Tools for Earth Meteorological Analysis |
| helsinki |
R Tools for Helsinki Open Data |
| heplots |
Visualizing Hypothesis Tests in Multivariate Linear Models |
| hergm |
Hierarchical Exponential-Family Random Graph Models |
| heritability |
Marker-Based Estimation of Heritability Using Individual Plant or Plot Data |
| hermite |
Generalized Hermite Distribution |
| hetmeta |
Heterogeneity Measures in Meta-Analysis |
| hett |
Heteroscedastic t-regression |
| het.test |
White's Test for Heteroskedasticity |
| heuristica |
Heuristics Including Take the Best and Unit-Weight Linear |
| hexbin |
Hexagonal Binning Routines |
| hextri |
Hexbin Plots with Triangles |
| hexView |
Viewing Binary Files |
| hflights |
Flights that departed Houston in 2011 |
| hgam |
High-dimensional Additive Modelling |
| hglasso |
Learning graphical models with hubs |
| hglm |
Hierarchical Generalized Linear Models |
| hglm.data |
Data for The hglm Package |
| hgm |
Holonomic Gradient Method and Gradient Descent |
| HGNChelper |
Handy Functions for Working With HGNC Gene Symbols and Affymetrix Probeset Identifiers |
| HH |
Statistical Analysis and Data Display: Heiberger and Holland |
| HHG |
Heller-Heller-Gorfine Tests of Independence and Equality of Distributions |
| hht |
The Hilbert-Huang Transform: Tools and Methods |
| HI |
Simulation from distributions supported by nested hyperplanes |
| HIBPwned |
Bindings for the HaveIBeenPwned.com Data Breach API |
| HiCfeat |
Multiple Logistic Regression for 3D Chromatin Domain Border Analysis |
| HiClimR |
Hierarchical Climate Regionalization |
| HiCseg |
Detection of domains in HiC data |
| hiddenf |
The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity |
| HiddenMarkov |
Hidden Markov Models |
| HiDimDA |
High Dimensional Discriminant Analysis |
| HiDimMaxStable |
Inference on High Dimensional Max-Stable Distributions |
| hierarchicalDS |
Functions For Performing Hierarchical Analysis of Distance Sampling Data |
| hierarchicalSets |
Set Data Visualization Using Hierarchies |
| hierband |
Convex Banding of the Covariance Matrix |
| hierDiversity |
Hierarchical Multiplicative Partitioning of Complex Phenotypes |
| hierformR |
Analysis of Dynamics Hierarchy Formation |
| hierfstat |
Estimation and Tests of Hierarchical F-Statistics |
| hierNet |
A Lasso for Hierarchical Interactions |
| HierO |
A graphical user interface for calculating power and sample size for hierarchical data |
| hier.part |
Hierarchical Partitioning |
| hiertest |
Convex Hierarchical Testing of Interactions |
| HIest |
Hybrid index estimation |
| highcharter |
A Wrapper for the 'Highcharts' Library |
| highD2pop |
Two-Sample Tests for Equality of Means in High Dimension |
| HighDimOut |
Outlier Detection Algorithms for High-Dimensional Data |
| highfrequency |
Tools For Highfrequency Data Analysis |
| highlight |
Syntax Highlighter |
| highmean |
Two-Sample Tests for High-Dimensional Mean Vectors |
| highr |
Syntax Highlighting for R Source Code |
| highriskzone |
Determining and Evaluating High-Risk Zones |
| highSCREEN |
High Throughput Screening for Plate Based Essays |
| highTtest |
Simultaneous Critical Values for t-Tests in Very High Dimensions |
| hillmakeR |
Perform occupancy analysis |
| HiLMM |
Estimation of Heritability in Linear Mixed Models |
| hindexcalculator |
H-Index Calculator using Data from a Web of Science (WoS) Citation Report |
| hint |
Tools for hypothesis testing based on Hypergeometric Intersection distributions |
| HiPLARM |
High Performance Linear Algebra in R |
| hiPOD |
hierarchical Pooled Optimal Design |
| hisemi |
Hierarchical Semiparametric Regression of Test Statistics |
| hisse |
Hidden State Speciation and Extinction |
| HistData |
Data Sets from the History of Statistics and Data Visualization |
| HistDAWass |
Histogram-Valued Data Analysis |
| histmdl |
A Most Informative Histogram-Like Model |
| histogram |
Construction of regular and irregular histograms with different options for automatic choice of bins |
| HistogramTools |
Utility Functions for R Histograms |
| historydata |
Data Sets for Historians |
| hit |
Hierarchical Inference Testing |
| hitandrun |
"Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes |
| hive |
Hadoop InteractiVE |
| HiveR |
2D and 3D Hive Plots for R |
| HIV.LifeTables |
HIV calibrated model life tables for countries with generalized HIV epidemics |
| HK80 |
Conversion Tools for HK80 Geographical Coordinate System |
| hkevp |
Spatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012) |
| hkex.api |
API to Retrieve Data from Hong Kong Stock Exchange |
| HKprocess |
Hurst-Kolmogorov Process |
| HLMdiag |
Diagnostic Tools for Hierarchical (Multilevel) Linear Models |
| HLSM |
Hierarchical Latent Space Network Model (HLSM) |
| HMDHFDplus |
Read HMD and HFD Data from the Web |
| hmeasure |
The H-measure and other scalar classification performance metrics |
| Hmisc |
Harrell Miscellaneous |
| HMM |
HMM - Hidden Markov Models |
| HMMCont |
Hidden Markov Model for Continuous Observations Processes |
| hmm.discnp |
Hidden Markov Models with Discrete Non-Parametric Observation Distributions |
| hmmm |
hierarchical multinomial marginal models |
| HMMpa |
Analysing accelerometer data using hidden Markov models |
| HMP |
Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP |
| HMPTrees |
Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data |
| HMR |
Flux Estimation with Static Chamber Data |
| hms |
Pretty Time of Day |
| HMVD |
Group Association Test using a Hidden Markov Model |
| hnp |
Half-Normal Plots with Simulation Envelopes |
| hoa |
Higher Order Likelihood Inference |
| hoardeR |
Information Retrieval for Genetic Datasets |
| holdem |
Texas Holdem simulator |
| Holidays |
Holiday and Half-Day Data, for Use with the 'TimeWarp' Package |
| homals |
Gifi Methods for Optimal Scaling |
| homeR |
Useful Functions for Building Physics |
| Homeric |
Doughnut Plots |
| homomorpheR |
Homomorphic Computations in R |
| HomoPolymer |
Theoretical Model to Simulate Radical Polymerization |
| homtest |
Homogeneity tests for Regional Frequency Analysis |
| hopbyhop |
Transmissions and Receptions in a Hop by Hop Network |
| hornpa |
Horn's (1965) Test to Determine the Number of Components/Factors |
| hot.deck |
Multiple Hot-Deck Imputation |
| HotDeckImputation |
Hot Deck Imputation Methods for Missing Data |
| Hotelling |
Hotelling's T-squared test and variants |
| hotspot |
Software Hotspot Analysis |
| hotspots |
Hot spots |
| housingData |
U.S. Housing Data from 2008 to 2016 |
| howmany |
A lower bound for the number of correct rejections |
| HPbayes |
Heligman Pollard mortality model parameter estimation using Bayesian Melding with Incremental Mixture Importance Sampling |
| hpcwld |
High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion |
| hpoPlot |
Functions for Plotting HPO Terms |
| hqmisc |
Miscellaneous convenience functions and dataset |
| hqreg |
Regularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression |
| HRM |
High-Dimensional Repeated Measures |
| hrr |
Horizontal rule for the R language |
| HSAR |
Hierarchical Spatial Autoregressive Model (HSAR) |
| HSAUR |
A Handbook of Statistical Analyses Using R (1st Edition) |
| HSAUR2 |
A Handbook of Statistical Analyses Using R (2nd Edition) |
| HSAUR3 |
A Handbook of Statistical Analyses Using R (3rd Edition) |
| hsdar |
Manage, Analyse and Simulate Hyperspectral Data |
| hSDM |
hierarchical Bayesian species distribution models |
| hsicCCA |
Canonical Correlation Analysis based on Kernel Independence Measures |
| hsm |
A Path-Based BCD for Proximal Function of Latent Group Lasso |
| hsmm |
Hidden Semi Markov Models |
| hsphase |
Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data |
| HSROC |
Meta-Analysis of Diagnostic Test Accuracy when Reference Test is Imperfect |
| HSSVD |
Biclustering with Heterogeneous Variance |
| htmltab |
Assemble Data Frames from HTML Tables |
| htmlTable |
Advanced Tables for Markdown/HTML |
| htmltools |
Tools for HTML |
| HTMLUtils |
Facilitates Automated HTML Report Creation |
| htmlwidgets |
HTML Widgets for R |
| hts |
Hierarchical and Grouped Time Series |
| HTSCluster |
Clustering High-Throughput Transcriptome Sequencing (HTS) Data |
| httk |
High-Throughput Toxicokinetics |
| httpcache |
Query Cache for HTTP Clients |
| httpcode |
'HTTP' Status Code Helper |
| httping |
'Ping' 'URLs' to Time 'Requests' |
| httpRequest |
Basic HTTP Request |
| httpuv |
HTTP and WebSocket Server Library |
| httr |
Tools for Working with URLs and HTTP |
| huge |
High-Dimensional Undirected Graph Estimation |
| HUM |
compute HUM value and visualize ROC curves |
| humanFormat |
Human-friendly formatting functions |
| humaniformat |
A Parser for Human Names |
| humarray |
Simplify Analysis and Annotation of Human Microarray Datasets |
| humidity |
An R Package for Calculating Water Vapor Measures from Temperature and Relative Humidity |
| hunspell |
Morphological Analysis and Spell Checker for R |
| hwde |
Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci |
| HWEBayes |
Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing |
| HWEintrinsic |
Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem |
| HW.pval |
Testing Hardy-Weinberg Equilibrium for Multiallelic Genes |
| hwriter |
HTML Writer - Outputs R objects in HTML format |
| hwriterPlus |
hwriterPlus: Extending the hwriter Package |
| hwwntest |
Tests of White Noise using Wavelets |
| HWxtest |
Exact Tests for Hardy-Weinberg Proportions |
| hybridEnsemble |
Build, Deploy and Evaluate Hybrid Ensembles |
| hybridHclust |
Hybrid Hierarchical Clustering |
| HybridMC |
Implementation of the Hybrid Monte Carlo and Multipoint Hybrid Monte Carlo sampling techniques |
| hybridModels |
Stochastic Hybrid Models in Dynamic Networks |
| HydeNet |
Hybrid Bayesian Networks Using R and JAGS |
| hydroApps |
Tools and models for hydrological applications |
| hydrogeo |
Groundwater Data Presentation and Interpretation |
| hydroGOF |
Goodness-of-fit functions for comparison of simulated and observed hydrological time series |
| HydroMe |
R codes for estimating water retention and infiltration model parameters using experimental data |
| hydroPSO |
Particle Swarm Optimisation, with focus on Environmental Models |
| hydrostats |
Hydrologic Indices for Daily Time Series Data |
| hydroTSM |
Time series management, analysis and interpolation for hydrological modelling |
| hyfo |
Hydrology and Climate Forecasting |
| HyperbolicDist |
The hyperbolic distribution |
| hyperdirichlet |
A generalization of the Dirichlet distribution |
| hypergea |
Hypergeometric Tests |
| hypergeo |
The Gauss Hypergeometric Function |
| hyperSpec |
Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...) |
| hypervolume |
High-Dimensional Kernel Density Estimation and Geometry Operations |
| hyphenatr |
Tools to Hyphenate Strings Using the 'Hunspell' Hyphenation Library |
| HyPhy |
Macroevolutionary phylogentic analysis of species trees and gene trees |
| hypothesestest |
Confidence Intervals and Tests of Statistical Hypotheses |
| hypothesisr |
Wrapper for the 'Hypothes.is' Web Annotation Service |
| hysteresis |
Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses |
| hzar |
Hybrid Zone Analysis using R |